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Applications

Available Applications

The table below shows typical software installed on the work servers.

Type Name of application Versions
Work
Shell bash 5.1.8
tcsh 6.22.03
zsh 5.8
Terminal gnome-terminal 3.40.3
rxvt 9.31
Text Editor vi(vim) 8.2.2637
emacs 27.2 1
Development
Environment		 java (OpenJDK) 11.0.23 34
17.0.11 34
21.0.3 34
Perl 5.32.1
Python 3.9.18
3.11.7 3
Ruby 3.0.4
PHP 8.0.30
Subversion (Client) 1.14.1
git 2.43.0 3
Compiler GNU(gcc) 11.4.1
GNU Compatible 8.5.0
12.3.03
Intel 2024 C++(icx/icpx) 2024.0.23
Intel 2024 Fortran(ifx) 2024.0.23
PGI(nvhpc) C++ (pgcc/pgc++) 24.13
PGI(nvhpc) Fortran (pgf77/pgf90/pgf95/pgfortran) 24.13
Parallel Library OpneMPI 4.1.5a13
IntelMPI 2024.0.23
Calculation Library Intel MKL 2024.0.23
ScaLAPACK 2.2.03
FFTW3 (OS standard) 3.3.8
FFTW3 (IntelMKL) include MKL23
Boost 1.75.0
Job Execution lsf 10.1.0.14
Misc. paps 0.7.1
evince (PDF viewer) 40.5
ddd 3.3.12
dvipdfmx 20240305
ghostview(gv) 3.7.4
cvmfs(client) 2.11.3
tex texlive2024
xerces-c 3.2.5
Mathematica 14.0
abinit 9.10.15
Ansys 2024R2

Mathematica

Mathematica is available on all nodes from cw.cc.kek.jp(login.cc.kek.jp).

Start-Up Commands

The start commands for Mathematica are listed below.

  • GUI start command
$> /usr/local/bin/mathematica
  • CUI start command
$> /usr/local/bin/math
  • MathLink Template Compiler
$> /usr/local/bin/mcc

Execution

This application is offered remotely via X-forwarding. Log in using ssh with X forwarding enabled.

Here is an example of how to access Mathematica from a RedHat-based OS.

1．Log in to cw.cc.kek.jp(or login.cc.kek.jp) enabling X forwarding

[client ~]$ ssh -X cw.cc.kek.jp

2．Start Mathematica

%> mathematica

Ansys

Ansys has been required to apply for use since October 2020. When using Ansys, please apply according to the usage information page.

  1. suspend-emacs is unavailable because there is possibility of freezing OS by using a whole CPU/memory resources on the server. ↩

  2. FFTW is introduced only in the standard OS version.( See this page for the details ). ↩

  3. When you'd like to use it, it's necessary to set a environment variables by the "module" command. ( See this page for the details ). ↩↩↩↩↩↩↩↩↩↩↩↩↩↩↩

  4. OpenJDK has been installed in /usr/lib/jvm/. ↩↩↩

  5. abinit has been installed in /sw/packages/abinit. When you'd like to use it, it's necessary to set a environment variables by the "module" command. ( See this page for the details ). ↩